Changes between Version 4 and Version 5 of jazz/mpdboot
- Timestamp:
- Jul 2, 2008, 11:36:32 AM (17 years ago)
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jazz/mpdboot
v4 v5 49 49 > EOF 50 50 }}} 51 * run '''mpdboot''' for 7 nodes and use '''mpdtrace''' to check the status of mpd process on each compute node. '''mpdringtest''' can test the speed of message passing. 51 * run '''mpdboot''' for 7 nodes and use '''mpdtrace''' to check the status of mpd process on each compute node. '''mpdringtest''' can test the speed of message passing. '''mpdallexit''' to terminate all mpd processes. 52 52 {{{ 53 53 jazz@bio-cluster-12:~$ mpdboot -n 7 … … 62 62 jazz@bio-cluster-12:~$ mpdringtest 100 63 63 time for 100 loops = 0.0729811191559 seconds 64 jazz@bio-cluster-12:~$ mpdallexit 64 65 }}} 65 66 66 == Test 1: Run mpd in local host == 67 == Test 1: single mpd and R-MPI in localhost == 68 69 * run mpd in localhost 70 {{{ 71 jazz@bio-cluster-12:~$ mpd & 72 [1] 1505 73 jazz@bio-cluster-12:~$ mpdtrace -l 74 bio-cluster-12_37007 (10.220.202.219) 75 }}} 76 * run R-MPI with single mpd in localhost 77 {{{ 78 jazz@bio-cluster-12:~$ R 79 80 R version 2.4.0 Patched (2006-11-25 r39997) 81 Copyright (C) 2006 The R Foundation for Statistical Computing 82 ISBN 3-900051-07-0 83 84 > library(Rmpi) 85 > mpi.spawn.Rslaves() 86 1 slaves are spawned successfully. 0 failed. 87 master (rank 0, comm 1) of size 2 is running on: bio-cluster-12 88 slave1 (rank 1, comm 1) of size 2 is running on: bio-cluster-12 89 > mpi.close.Rslaves() 90 mpi.close.Rslaves() 91 [1] 1 92 > mpi.quit(save="no") 93 mpi.quit(save="no") 94 jazz@bio-cluster-12:~$ 95 }}}