close Warning: Can't synchronize with repository "(default)" (Unsupported version control system "svn": /usr/lib/python2.7/dist-packages/libsvn/_fs.so: failed to map segment from shared object: Cannot allocate memory). Look in the Trac log for more information.

Changes between Version 13 and Version 14 of jazz/11-05-04


Ignore:
Timestamp:
May 7, 2011, 12:36:46 AM (15 years ago)
Author:
jazz
Comment:

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Legend:

Unmodified
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  • jazz/11-05-04

    v13 v14  
    120120 * <註> 目前有兩個工具可以把 ms_print 的 ASCII 圖變成更好看，一個是 KDE 的 [https://projects.kde.org/projects/extragear/sdk/massif-visualizer massif-visualizer]，另一個是 GNOME 的 [http://live.gnome.org/MassifG MassifG](有 Ubuntu 套件在 PPA)
    121121   * <備註> [http://milianw.de/blog/massif-visualizer-now-with-user-interaction#comment-951 安裝 massif-visualizer 的步驟]
     122 * 使用 [http://packages.debian.org/valgrind valgrind] 的 [http://valgrind.org/docs/manual/cl-manual.html callgrind] 工具來進行動態連結分析
     123{{{
     124~/velvet_1.1.03$ valgrind --tool=callgrind ./velveth output 17 -fasta -short data/test_long.fa
     125~/velvet_1.1.03$ valgrind --tool=callgrind ./velvetg output/ -exp_cov 3 -min_contig_lgth 100
     126~/velvet_1.1.03$ callgrind_annotate callgrind.out.12046 > velveth_callgrind.log
     127~/velvet_1.1.03$ callgrind_annotate callgrind.out.12074 > velvetg_callgrind.log
     128}}}
    122129 * 使用 gprof 進行 profile 分析
    123130{{{