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- Timestamp:
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Mar 19, 2008, 5:59:36 PM (18 years ago)
- Author:
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chris
- Comment:
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| 1 | | = How to install R-MPI = |
| | 1 | = R-MPI = |
| 2 | 2 | |
| 3 | 3 | == What is R-MPI == |
| 4 | 4 | |
| 5 | 5 | == Software Requirement == |
| | 6 | * MPI implements |
| | 7 | * mpich2, mpich, LAM-MPI (7.0.2 or higher) |
| | 8 | * For mpich2 installation, please reference [http://trac.nchc.org.tw/grid/wiki/MPICH2_Install here] |
| | 9 | * OpenMPI may causes some problem, not for sure. |
| | 10 | * R (2.0.0 or higher) |
| | 11 | * Assuming that your system is ubuntu or you got apt-get commands, you can just install R by : |
| | 12 | {{{ |
| | 13 | root@client-01:~# apt-get install r-base-core |
| | 14 | }}} |
| | 15 | * gcc-4.2 |
| | 16 | * As previous step, you can install gcc-4.2 by : |
| | 17 | {{{ |
| | 18 | root@client-01:~# apt-get install gcc-4.2 |
| | 19 | }}} |
| 6 | 20 | |
| 7 | | == Install == |
| 8 | | |
| | 21 | ---- |
| | 22 | == Install Rmpi == |
| | 23 | * Download for Rmpi from [http://www.stats.uwo.ca/faculty/yu/Rmpi/ here]. |
| | 24 | The latest version is 0.5-5. |
| | 25 | {{{ |
| | 26 | root@client-01:/opt# wget http://www.stats.uwo.ca/faculty/yu/Rmpi/download/linux/Rmpi_0.5-5.tar.gz |
| | 27 | }}} |
| | 28 | * Assuming that your system have installed R, gcc-4.2 and any one of MPI implements already. |
| | 29 | Then we can start to install Rmpi as follows |
| | 30 | {{{ |
| | 31 | root@client-01:/opt# R CMD INSTALL Rmpi_0.5-5.tar.gz |
| | 32 | }}} |
| | 33 | * Rmpi have been installed successfully so far. |
| | 34 | ---- |
| | 35 | == Test for Rmpi == |
| | 36 | ---- |
| 9 | 37 | == Reference == |
| 10 | 38 | |